PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010107116.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family NAC
Protein Properties Length: 141aa    MW: 16509.3 Da    PI: 10.2606
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010107116.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM115.94e-36111372115
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk............kvkaeekewyfFskrdkkyatgkrknratksgyWk 84 
                     ++GfrF Ptdeel+ +yL++k+ g++ e+e+vi+evd yk+ePwdLp+            ++k++++ w fF+krd k++++kr +r+tk+g+Wk
  XP_010107116.1  11 AAGFRFYPTDEELIADYLRPKILGTHPEVEDVIAEVDFYKFEPWDLPRfcslfsfiepksRIKSKDRTWLFFCKRDCKKPRSKRLKRSTKTGFWK 105
                     68*********************************************6699******9998999999**************************** PP

             NAM  85 atgkdkevlsk.kgelvglkktLvfykgrapk 115
                      tgk+  ++++ +++ +g +ktLvf+kg +p 
  XP_010107116.1 106 ITGKEMVIKDQeTKKCIGKRKTLVFHKGPTPG 137
                     ********99856666**********987664 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.79E-358138IPR003441NAC domain
PROSITE profilePS5100536.75510141IPR003441NAC domain
PfamPF023659.0E-1812135IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    Send to blast
MSITELPPGM AAGFRFYPTD EELIADYLRP KILGTHPEVE DVIAEVDFYK FEPWDLPRFC  60
SLFSFIEPKS RIKSKDRTWL FFCKRDCKKP RSKRLKRSTK TGFWKITGKE MVIKDQETKK  120
CIGKRKTLVF HKGPTPGQTT N
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-22114112134NO APICAL MERISTEM PROTEIN
1ut4_B2e-22114112134NO APICAL MERISTEM PROTEIN
1ut7_A2e-22114112134NO APICAL MERISTEM PROTEIN
1ut7_B2e-22114112134NO APICAL MERISTEM PROTEIN
3swm_A2e-22114115137NAC domain-containing protein 19
3swm_B2e-22114115137NAC domain-containing protein 19
3swm_C2e-22114115137NAC domain-containing protein 19
3swm_D2e-22114115137NAC domain-containing protein 19
3swp_A2e-22114115137NAC domain-containing protein 19
3swp_B2e-22114115137NAC domain-containing protein 19
3swp_C2e-22114115137NAC domain-containing protein 19
3swp_D2e-22114115137NAC domain-containing protein 19
4dul_A2e-22114112134NAC domain-containing protein 19
4dul_B2e-22114112134NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010107116.11e-100NAC domain-containing protein 74
TrEMBLW9RVU81e-100W9RVU8_9R
STRINGVIT_02s0025g03020.t012e-31(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20652586
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03200.12e-33NAC domain containing protein 45